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Old Wines in a New Barrel
summary written by Monica Bobra, SLAC
Communication Office
Tomohisa Kuzuyama1,2, Joseph P.
Noel1 and Stéphane B. Richard1
1Jack Skirball Chemical Biology and Proteomics
Laboratory, The Salk Institute for Biological Studies, 10010 N Torrey Pines Rd, La Jolla, CA 92037, USA
2Laboratory of Cell Biotechnology, Biotechnology Research
Center, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657,
Japan
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Using x-ray diffraction data collected on Beam Line 9-2 at SSRL, and other beam
lines at the ESRF and BNL, scientists at The Salk Institute for Biological
Studies discovered the three-dimensional structure of a protein that bacteria
use to make biologically active compounds. By effectively engineering this
protein, scientists may be able to create new drugs with therapeutic
properties. The bacterial protein, known as Orf2, contains a previously unknown
structure shaped like a barrel. "Looking at the protein's structure is like
opening up a clock and understanding how all the parts fit together and work in
unison," said Joseph Noel, co-author of a June 16 Nature publication on the
research. Orf2 is one of a small number in a recently isolated family of
proteins that create compounds with anti-microbial, anti-cancer, anti-viral,
anti-inflammatory, and anti-oxidant properties. "We currently use the protein
as a surrogate chemist, allowing it to catalyze chemical reactions that would
be difficult or impossible to do with traditional chemistry," said Noel. This
allows the researchers to slightly modify existing chemicals, which may lead
them to discover new drugs. "We hope to use and engineer the protein to create
novel compounds," said co-investigator Stéphane Richard.
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