2009 Publications

Journal Papers


  1. J. Abendroth, A. C. Kreger and W. G. J. Hol, "The Dimer Formed by the Periplasmic Domain of EpsL from the Type 2 Secretion System of Vibrio parahaemolyticus", J. Struct. Biol. 168, 313 (2009) doi: 10.1016/j.jsb.2009.07.022
  2. J. Abendroth, D. D. Mitchell, K. V. Korotkov, T. L. Johnson, A. Kreger, M. Sandkvist and W. G. J. Hol, "The Three-dimensional Structure of the Cytoplasmic Domains of EpsF from the Type 2 Secretion System of Vibrio cholerae", J. Struct. Biol. 166, 303 (2009) doi: 10.1016/j.jsb.2009.03.009
  3. V. Aguilar-Guerrero, R. J. Lobo-Lapidus and B. C. Gates, "Genesis of a Cerium Oxide Supported Gold Catalyst for CO Oxidation: Transformation of Mononuclear Gold Complexes into Clusters as Characterized by X-ray Absorption Spectroscopy", J. Phys. Chem. C 113, 3259 (2009) doi: 10.1021/jp808567a
  4. N. V. Aieta, R. J. Stanis, J. L. Horan, M. A. Yandrasits, D. J. Cookson, B. Ingham, M. F. Toney, S. J. Hamrock and A. M. Herring, "Clipped Random Wave Morphologies and the Analysis of the SAXS of an Ionomer Formed by Copolymerization of Tetrafluoroethylene and CF2=CFO(CF2)4SO3H", Macromolecules 42, 5774 (2009) doi: 10.1021/ma900719a
  5. G. Akgül, F. Aksoy, Y. Ufuktepe and J. Lüning, "Experimental Estimate of Electron Escape Depth in Fe", Solid State Commun. 149, 384 (2009) doi: 10.1016/j.ssc.2008.12.014
  6. A. E. Aleshin, S. Gramatikova, G. L. Hura, A. Bobkov, A. Y. Strongin, B. Stec, J. A. Tainer, R. C. Liddington and J. W. Smith, "Crystal and Solution Structures of a Prokaryotic M16B Peptidase: an Open and Shut Case", Structure 17, 1465 (2009) doi: 10.1016/j.str.2009.09.009
  7. N. Aliaga-Alcalde, S. DeBeer George, I. Alfaro-Fuentes, G. J. T. Cooper, N. Barba-Behrens, S. Bernes and J. Reedijk, "Physical Characterization and Biological Studies of a (Streptidine)(PtIICl4) Compound", Polyhedron 16, 3459 (2009) doi: 10.1016/j.poly.2009.07.022
  8. I. Aliagas-Martin, D. Burdick, L. Corson, J. Dotson, J. Drummond, C. Fields, O. W. Huang, T. Hunsaker, T. Kleinheinz, E. Krueger, J. Liang, J. Moffat, G. Phillips, R. Pulk, T. E. Rawson, M. Ultsch, L. Walker, C. Wiesmann, B. Zhang, B.-Y. Zhu and A. G. Cochran, "A Class of 2,4-Bisanilinopyrimidine Aurora A Inhibitors with Unusually High Selectivity against Aurora B", J. Med. Chem. 52, 3300 (2009) doi: 10.1021/jm9000314
  9. S. G. Aller, J. Yu, A. Ward, Y. Weng, S. Chittaboina, R. Zhuo, P. M. Harrell, Y. T. Trinh, Q. Zhang, I. L. Urbatsch and G. Chang, "Structure of P-Glycoprotein Reveals a Molecular Basis for Poly-specific Drug Binding", Science 323, 1718 (2009) doi: 10.1126/science.1168750
  10. O. Almog, A. Gonzalez, N. Godin, M. de Leeuw, M. J. Mekel, D. Klein, S. Braun, G. Shoham and R. L. Walter, "The Crystal Structures of the Psychrophilic Subtilisin S41 and the Mesophilic Subtilisin Sph Reeal the Same Calcium-loaded State", Proteins: Struct. Funct. Genet. 74, 489 (2009) doi: 10.1002/prot.22175
  11. Y. An, C. Y. Chen, B. Moyer, P. Rotkiewicz, M.-A. Elsliger, A. Godzik, I. A. Wilson and W. E. Balch, "Structural and Functional Analysis of the Globular Head Domain of p115 Provides Insight into Membrane Tethering", J. Mol. Biol. 391, 26 (2009) doi: 10.1016/j.jmb.2009.04.062
  12. D. R. Artis, J. J. Lin, C. Zhang, W. Wang, U. Mehra, M. Perreault, D. Erbe, H. I. Krupka, B. P. England, J. Arnold, A. N. Plotnikov, A. Marimuthu, H. Nguyen, S. Will, M. Signaevsky, J. Kral, J. Cantwell, C. Settachatgull, D. S. Yan, D. Fong, A. Oh, S. Shi, P. Womack, B. Powell, G. Habets, B. L. West, K. Y. J. Zhang, M. V. Milburn, G. P. Vlasuk, K. P. Hirth, K. Nolop, G. Bollag, P. N. Ibrahim and J. F. Tobin, "Scaffold-based Discovery of Indeglitazar, a PPAR Pan-active Anti-diabetic Agent", Proc. Natl. Acad. Sci. USA 106, 262 (2009) doi: 10.1073/pnas.0811325106
  13. M. Bajorek, H. L. Schubert, J. McCullough, C. Langelier, D. M. Eckert, W.-M. B. Stubblefield, N. T. Uter, D. G. Myszka, C. P. Hill and W. I. Sundquist, "Structural Basis for ESCRT-III Protein Autoinhibition", Nat. Struct. Mol. Biol. 16, 754 (2009) doi: :10.1038/nsmb.l621
  14. P. Banerjee, S. Sproules, T. Weyermuller, S. DeBeer George and K. Wieghardt, "Electronic Structure of the [Tris(dithiolene)chromium]z (z=0, 1-, 2-, 3-) Electron Transfer Series and Their Manganese(IV) Analogues. An X-ray Absorption Spectroscopic and Density Functional Theoretical Study", Inorg. Chem. 48, 5829 (2009) doi: 10.1021/ic900154v
  15. J. R. Bargar, C. C. Fuller, M. A. Marcus, A. J. Brearley, M. Perez De la Rosa, S. M. Webb and W. A. Caldwell, "Structural Characterization of Terrestial Microbial Mn Oxides from Pinal Creek, AZ", Geochim. Cosmochim. Acta 73, 889 (2009) doi: 10.1016/j.gca.2008.10.036
  16. F. C. Beasley, E. D. Vines, J. C. Grigg, Q. Zheng, S. Liu, G. A. Lajole, M. E. P. Murphy and D. E. Heinrichs, "Characterization of Staphyloferrin A Biosynthetic and Transport Mutants in Staphylococcus aureus", Mol. Microbiol. 72, 947 (2009) doi: 10.1111/j.1365-2958.2009.06698.x
  17. M. J. Beazley, R. J. Martinez, P. A. Sobecky, S. M. Webb and M. Taillefert, "Nonreductive Biomineralization of Uranium(VI) Phosphate Via Microbial Phosphatase Activity in Anaerobic Conditions", Geomicrobiol. J.. 26, 431 (2009) doi: 10.1080/01490450903060780
  18. C. B. Bell, III, J. R. Calhoun, E. Bobyr, P.-p. Wei, B. Hedman, K. O. Hodgson, W. F. DeGrado and E. I. Solomon, "Spectroscopic Definition of the Biferrous and Biferric Sites in de Novo Designed Four-helix Bundle DFsc Peptides: Implications for O2 Reactivity of Binuclear Non-heme Iron Enzymes", Biochemistry 48, 59 (2009) doi: 10.1021/bi8016087
  19. U. Bergmann and P. Glatzel "X-ray Emission Spectroscopy", Photosynth. Res. 102, 255 (2009) doi: 10.1007/s11120-009-9483-6
  20. R. E. Berry, M. N. Shokhirev, A. Y. W. Ho, F. Yang, T. K. Shokhireva, H. Zhang, A. Weichsel, W. R. Montfort and F. A. Walker, "Effect of Mutation of Carboxyl Side-Chain Amino Acids Near the Heme on the Midpoint Potentials and Ligand Binding Constants of Nitrophorin 2 and its NO, Histamine, and Imidazole Complexes", J. Am. Chem. Soc. 131, 2313 (2009) doi: 10.1021/ja808105d
  21. C. H. Booth, E. D. Bauer, A. D. Bianchi, F. Ronning, J. D. Thompson, J. L. Sarrao, J. Young. Cho, J. Y. Chan, C. Capan and Z. Fisk, "Local Structure and Site Occupancy of Cd and Hg Substitutions in CeTin5 (T=Co, Rh, and Ir)", Phys. Rev. B 79, 144519 (2009) doi: 10.1103/PhysRevB.79.144519
  22. C. H. Booth, M. D. Walter, D. Kazhdan, Y.-J. Hu, W. W. Lukens, E. D. Bauer, L. Maron, O. Eisenstein and R. A. Andersen, "Decamethyltterbocene Complexes of Bipyridines and Diazabutadienes: Multiconfigurational Ground States and Open-Shell Singlet Formation", J. Am. Chem. Soc. 131, 6480 (2009) doi: 10.1021/ja809624w
  23. I. Bosanac, H. R. Maun, S. J. Scales, X. Wen, A. Lingel, F. J. Bazan, F. J. de Sauvage, S. G. Hymowitz and R. A. Lazarus, "The Structure of SHH in Complex with HHIP Reveals a Recognition Role for the Shh Pseudo Active Site in Signaling", Nat. Struct. Mol. Biol. 16, 691 (2009) doi: 10.1038/nsmb.1632
  24. A. Braun, X. Zhang, Y. Sun, U. Müller, Z. Liu, S. Erat, M. Ari, H. Grimmer, S. S. Mao and T. Graule, "Correlation of High Temperature X-ray Photoemission Valence Band Spectra and Conductivity in Strained LaSrFeNi Oxide on SrTiO3(110)", Appl. Phys. Lett. 95, 022107 (2009)
  25. T. Brezesinski, J. Wang, J. Polleux, B. Dunn and S. H. Tolbert, "Templated Nanocrystal-based Porous TiO2 Films for Next-Generation Electrochemical Capacitors", J. Am. Chem. Soc. 131, 1802 (2009) doi: 10.1021/ja8057309
  26. D. N. Briggs, K. H. Lawrence and A. T. Bell, "An Investigation of Carbon-supported CuCl2/PdCl2 Catalysts for Diethyl Carbonate Synthesis", Appl. Catal., A 366, 71 (2009) doi: 10.1016/j.apcata.2009.06.032
  27. P. Brocorens, A. Van Vooren, M. L. Chabinyc, M. F. Toney, M. Shkunov, M. Heeney, I. McCulloch, J. Cornil and R. Lazzaroni, "Solid-State Supramolecular Organization of Polythiophene Chains Containing Thienothiophene Units", Adv. Mater. 21, 1193 (2009) doi: 10.1002/adma.200801668
  28. A. T. Brunger, B. DeLaBarre, J. M. Davies and W. I. Weis, "X-ray Structure Determination at Low Resolution", Acta Crystallogr. D 65, 128 (2009) doi: 10.1107/S0907444908043795
  29. C. Bryant, I. D. Kerr, M. Debnath, K. K. H. Ang, J. Ratnam, R. S. Ferreira, P. Jaishankar, D. Zhao, M. R. Arkin, J. H. McKerrow, L. S. Brinen and A. R. Renslo, "Novel Non-peptidic Vinylsulfones Targeting the S2and S3 Subsites of Parasite Cysteine Proteases", Bioorg. Med. Chem. Lett. 19, 6218 (2009) doi: 10.1016/j.bmcl.2009.08.098
  30. M. W. Busbee, B. D. Kocar and S. G. Benner, "Irrigation Produces Elevated Arsenic in the Underlying Groundwater of a Semi-arid Basin in Southwestern Idaho", Appl. Geochem. 24, 843 (2009) doi: 10.1016/j.apgeochem.2009.01.011
  31. Z. T. Campbell, W. R. Montfort and T. O. Baldwin, "Crystal Structure of the Bacterial Luciferase: Flavin Complex Provides Insight into the Function of the B Subunit", Biochemistry 48, 6085 (2009) doi: 10.1021/bi900003t
  32. H. A. Castillo-Michel, N. Zuverza-Mena, J. G. Parsons, K. M. Dokken, M. Duarte-Gardea, J. R. Peralta-Videa and J. L. Gardea-Torresdey, "Accumulation, Speciation, and Coordination of Arsenic in an Inbred Line and a Wild Type Cultivar of the Desert Plant Species Chilopsis linearis (Desert willow)", Phytochemistry 70, 540 (2009) doi: 10.1016/j.phytochem.2009.01.010
  33. H. A. Castillo-Michel, N. Hernandez, A. Martinez-Martinez, J. G. Parsons, J. R. Peralta-Videa and J. L. Gardea-Torresdey, "Coordination and Speciation of Cadmium in Corn Seedlings and Its Effects on Macro- and Micronutrients Uptake", Plant Physiol. Bioch. 47, 608 (2009) doi: 10.1016/j.plaphy.2009.02.005
  34. N. C. Cates, R. Gysel, Z. Beiley, C. E. Miller, M. F. Toney, M. Heeney, I. McCulloch and M. D. McGehee, "Tuning the Properties of Polymer Bulk Heterojunction Solar Cells by Adjusting Fullerene Size to Control Intercalation", Nano Lett. 9, 4153 (2009) doi: 10.1021/nl9023808
  35. R. Celikel, E. C. Peterson, S. M. Owens and K. I. Varughese, "Crystal Structures of a Therapeutic Single Chain Antibody in Complex with Methylenedioxymethamphetamine", Protein Sci. 18, 2336 (2009) doi: 10.1002/pro.244
  36. E. Chalmin, F. Farges and G. E. Brown, Jr., "A Pre-edge Analysis of Mn K-edge XANES Spectra to Help Determine the Speciation of Manganese in Minerals and Glasses", Contrib. Mineral. Petr. 157, 111 (2009) doi: 10.1007/s00410-008-0323-z
  37. S. L. Chan, L. Y. Low, S. Hsu, S. Li, T. Liu, E. Santelli, G. Le Negrate, J. C. Reed, V. L. Woods, Jr. and J. Pascual, "Crystal Structure of a Bacterial TIR Domain", J. Biol. Chem. 284, 21386 (2009) doi: 10.1074/jbc.C109.007591
  38. T. H. Charpentier, P. T. Wilder, M. A. Liriano, K. M. Varney, S. Zhong, A. Coop, E. Pozharski, A. D. MacKerell, Jr., E. A. Toth and D. J. Weber, "Small Molecules Bound to Unique Sites in the Target Protein Binding Cleft of Calcium-Bound S100B as Characterized by Nuclear Magnetic Resonance and X-ray Crystallography", Biochemistry 48, 6202 (2009) doi: 10.1021/bi9005754
  39. Y. L. Chen, J. G. Analytis, J. H. Chu, Z. K. Liu, S.-K. Mo, X. L. Qi, H. J. Zhang, D. H. Lu, X. Dai, S. C. Zhang, I. R. Fisher, Z. Hussain and Z.-X. Shen, "Experimental Realization of a Three-Dimensional Topological Insulator, Bi2Te3", Science 325, 178 (2009) doi: 10.1126/science.1173034
  40. D. M. Chenoweth and P. B. Dervan, "Allosteric Modulation of DNA by Small Molecules", Proc. Natl. Acad. Sci. USA 106, 13175 (2009) doi: 10.1073/pnas.0906532106
  41. S. Cheong, J. Watt, B. Ingham, M. F. Toney and R. D. Tilley, "In Situ and Ex Situ Studies of Platinum Nanocrystals: Growth and Evolution in Solution", J. Am. Chem. Soc. 131, 14590 (2009) doi: 10.1021/ja9065688
  42. L. T. Cherney, M. M. Cherney, C. R. Garen and M. N. G. James, "The Structure of the Arginine Repressor from Mycobacterium tuberculosis Bound with Its DNA Operator and Co-repressor, L-Arginine", J. Mol. Biol. 388, 85 (2009) doi: 10.1016/j.jmb.2009.02.053
  43. R. R. Chianelli, G. Berhault and B. Torres, "Unsupported Transition Metal Sulfide Catalysts: 100 Years of Science and Application", Catal. Today 147, 275 (2009) doi: 10.1016/j.cattod.2008.09.041
  44. J. G. Chigvinadze, J. V. Acrivos, I. G. Akhvlediani, M. I. Chubabria, T. L. Kalabegishvili and T. I. Sanadze, "The Investigation of EPR Paramagnetic Probe Line Width and Shape Temperature Dependence in High-temperature Superconductors of Bi-Pb-Sr-Ca-Cu-O System", Phys. Lett. A 373, 874 (2009) doi: 10.1016/j.physleta.2008.11.066
  45. J. Cho, R. Sarangi, J. Annaraj, S. Y. Kim, M. Kubo, T. Ogura, E. I. Solomon and W. Nam, "Geometric and Electronic Structure and Reactivity of a Mononuclear 'Side-on' Nickel(III)-peroxo Complex", Nat. Chem. 1, 568 (2009) doi: 10.1038/nchem.366
  46. M. C. Choi, U. Raviv, H. P. Miller, M. R. Gaylord, E. Kris, D. Ventimiglia, D. J. Needleman, M. W. Kim, L. Wilson, S. C. Feinstein and C. R. Safinya, "Human Microtubule-Associated-Protein Tau Regulates the Number of Protofilaments in Microtubules: A Synchrotron X-ray Scattering Study", Biophys. J. 97, 519 (2009) doi: 10.1016/j.bpj.2009.04.047
  47. S. Choi, P. A. O'Day and J. G. Hering, "Natural Attenuation of Arsenic by Sediment Sorption and Oxidation", Environ. Sci. Technol. 43, 4253 (2009) doi: 10.1021/es802841x
  48. R. V. Chopdekar, E. Arenholz and Y. Suzuki, "Orientation and Thickness Dependence of Magnetization at the Interfaces of Highly Spin-polarized Manganite Thin Films ", Phys. Rev. B 79, 104417 (2009) doi: 10.1103/PhysRevB.79.104417
  49. M. S. Chow, B. E. Eser, S. A. Wilson, K. O. Hodgson, B. Hedman, P. F. Fitzpatrick and E. I. Solomon, "Spectroscopy and Kinetics of Wild-Type and Mutant Tyrosine Hydroxylase: Mechanistic Insight into O2 Activation", J. Am. Chem. Soc. 131, 7685 (2009) doi: 10.1021/ja810080c
  50. K. B. Chung, J. P. Long, H. Seo, G. Lucovsky and D. Nordlund, "Thermal Evolution and Electrical Correlation of Defect States in Hf-based High-k Dielectrics on n-Type Ge (100): Local Atomic Bonding Symmetry", J. Appl. Phys. 106, 074102 (2009) doi: 10.1063/1.3236679
  51. W. A. Clay, Z. Liu, W. Yang, J. D. Fabbri, J. E. Dahl, R. M. K. Carlson, Y. Sun, P. A. Pianetta, N. Melosh and Z.-X. Shen, "Origin of the Monochromatic Photoemission Peak in Diamondoid Monolayers", Nano Lett. 9, 57 (2009) doi: 10.1021/nl802310k
  52. V. Cody, J. Pace, L. Lin and A. Gangjee, "The Z Isomer of 2,4-diaminofuro[2,3-d]pyrimidine Antifolate Promotes Unusual Crystal Packing in a Human Dihydrofolate Reductase Ternary Complex", Acta Crystallogr. F 65, 762 (2009) doi: 10.1107/S1744309109025548
  53. V. Cody, J. Pace, J. Makin, J. Piraino, S. F. Queener and A. Rosowsky, "Correlations of Inhibitor Kinetics for Pneumocystis jirovacii and Human Dihydrofolate Reductase with Structural Data for Human Active Site Mutant Enzyme Complexes", Biochemistry 48, 1702 (2009) doi: 10.1021/bi801960h
  54. F. Cohen, B. Alicke, L. O. Elliott, J. A. Flygare, T. Goncharov, S. F. Keteltas, M. C. Franklin, S. Frankovitz, J.-P. Stephan, V. Tsui, D. Vucic, H. Wong and W. J. Fairbrother, "Orally Bioavailable Antagonists of Inhibitor of Apoptosis Proteins Based on an Azabicyclooctane Scaffold", J. Med. Chem. 52, 1723 (2009) doi: 10.1021/jm801450c
  55. A. R. Conlan, H. L. Axelrod, A. E. Cohen, E. C. Abresch, J. Zuris, D. Yee, R. Nechushtai, P. A. Jennings and M. L. Paddock, "Crystal Structures of Miner 1: The Redox-active 2Fe-2S Protein Causative in Wolfram Syndrome 2", J. Mol. Biol. 392, 143 (2009) doi: 10.1016/j.jmb.2009.06.079
  56. A. R. Conlan, M. L. Paddock, H. L. Axelrod, A. E. Cohen, E. C. Abresch, S. Wiley, M. Roy, R. Nechushtai and P. A. Jennings, "The Novel 2Fe-2S Outer Mitochondrial Protein MitoNEET Displays Conformational Flexibility in Its N-terminal Cytoplasmic Tethering Domain", Acta Crystallogr. F 65, 654 (2009) doi: 10.1107/S1744309109019605
  57. C. Corrado, Y. Jiang, F. Oba, M. Kozina, F. Bridges and J. Z. Zhang, "Synthesis, Structural, and Optical Properties of Stable ZnS:Cu,Cl Nanocrystals", J. Phys. Chem. A 13, 3830 (2009) doi: 10.1021/jp809666t
  58. J. M. Crawford, T. P. Korman, J. W. Labonte, A. L. Vagstad, E. A. Hill, O. Kamari-Bidkorpeh, S.-C. Tsai and C. A. Townsend, "Structural Basis for Biosynthetic Programming of Fungal Aromatic Polyketide Cyclization", Nature 461, 1139 (2009) doi: 10.1038/nature08475
  59. P. D'Angelo, A. Zitolo, V. Migliorati, G. Mancini, I. Persson and G. Chillemi, "Structural Investigation of Lanthanoid Coordination: A Combined XANES and Molecular Dynamics Study", Inorg. Chem. 48, 10239 (2009) doi: 10.1021/ic901264e
  60. K. Dalal, N. Nguyen, M. Alami, J. Tan, T. F. Moraes, W. C. Lee, R. Maurus, S. S. Sligar, G. D. Brayer and F. Duong, "Structure, Binding and Activity of Syd, a SecY Interacting Protein", J. Biol. Chem. 284, 7897 (2009) doi: 10.1074/jbc.M808305200
  61. E. Damian Risberg, F. Jalilehvand, B. O. Leung, L. G. M. Pettersson and M. Sandström, "Theoretical and Experimental Sulfur K-edge X-ray Absorption Spectroscopic Study of Cysteine, Cystine, Homocysteine, Penicillamine, Methionine and Methionine Sulfoxide", Dalton Trans. 3542 (2009) doi: 10.1039/b819257j
  62. E. Damian Risberg, J. Mink, A. Abbasi, M. Yu. Skripkin, L. Hajba, P. Lindqvist-Reis, E. Bencze and M. Sandström, "Ambidentate Coordination in Hydrogen Bonded Dimethyl Sulfoxide, (CH3)2)SO···H3O+, and in Dichlorobis(dimethyl sulfoxide) Palladium(II) and Platinum(II) Solid Solvates, by Vibrational and Sulfur K-edge X-ray Absorption Spectroscopy", Dalton Trans. 1328 (2009) doi: 10.1039/b814252a
  63. D. R. Davies, B. Mamat, O. T. Magnusson, J. Christensen, M. H. Haraldson, R. Mishra, B. Pease, E. Hansen, J. Singh, D. Zembower, H. Kim, A. S. Kiselyov, A. B. Burgin, M. E. Gurney and L. J. Stewart, "Discovery of Leukotriene A4 Hydrolase Inhibitors Using Metabolomics Biased Fragment Crystallography", J. Med. Chem. 52, 4694 (2009) doi: 10.1021/jm900259h
  64. C. J. De Feo, S. G. Aller, G. S. Siluvai, N. J. Blackburn and V. M. Unger, "Three-dimensional Structure of the Human Copper Transporter hCTR1", Proc. Natl. Acad. Sci. USA 106, 4237 (2009) doi: 10.1073/pnas.0810286106
  65. J. de Vicente, R. T. Hendricks, D. B. Smith, J. B. Fell, J. Fischer, S. R. Spencer, P. J. Stengel, P. Mohr, J. E. Robinson, J. F. Blake, R. K. Hilgenkamp, C. Yee, G. Adjabeng, T. R. Elworthy, J. Li, B. Wang, J. T. Bamberg, S. F. Harris, A. Wong, V. J. P. Leveque, I. Najera, S. L. Pogam, S. Rajyaguru, G. Ao-leong, L. Alexandrova, S. Larrabee, M. Brandl, A. Briggs, S. Suktankar and R. Farrell, "Non-nucleoside Inhibitors of HCV Polymerase NS5B. Part 4: Structure-based Design, Synthesis, and Biological Evaluation of Benzo[d]isothizole-1,1-dioxides", Bioorg. Med. Chem. 19, 5652 (2009) doi: 10.1016/j.bmcl.2009.08.022
  66. E. W. Debler, R. Müller, D. Hilvert and I. A. Wilson, "An Aspartate and a Water Molecule Mediate Efficient Acid-Base Catalysis in a Tailored Antibody Pocket", Proc. Natl. Acad. Sci. USA 106, 18539 (2009) doi: 10.1073/pnas.0902700106
  67. S. Della-Longa, L. X. Chen, P. Frank, K. Hayakawa, K. Hatada and M. Benfatto, "Direct Deconvolution of Two-State Pump-Probe X-ray Absorption Spectra and the Structural Changes in a 100 ps Transient of Ni(II)-tetramesitylporphyrin", Inorg. Chem. 48, 3934 (2009) doi: 10.1021/ic8008943
  68. D. M. DeLongchamp, R. Joseph. Kline, Y. Jung, D. S. Germack, E. K. Lin, A. J. Moad, L. J. Richter, M. F. Toney, M. Heeney and I. McCulloch, "Controlling the Orientation of Terraced Nanoscale "Ribbons" of a Poly(thiophene) Semiconductor", ACS Nano 3, 780 (2009) doi: 10.1021/nn800574f
  69. C. A. Demmelmaier, R. E. White, J. A. van Bokhoven and S. L. Scott, "Evidence for a Chromasiloxane Ring Size Effect in Phillips (Cr/SiO2) Polymerization Catalysts", J. Catal. 262, 44 (2009) doi: 10.1016/j.jcat.2008.11.024
  70. A. Dey, Y. Jiang, P. Ortiz de Montellano, K. O. Hodgson, B. Hedman and E. I. Solomon, "S K-edge XAS and DFT Calculations on Cytochrome P450: Covalent and Ionic Contributions to the Cysteine-Fe Bond and Their Contribution to Reactivity", J. Am. Chem. Soc. 131, 7869 (2009) doi: 10.1021/ja901868q
  71. L. Dharmarajan, J. L. Kraszewski, B. Mukhopadhyay and P. W. Dunten, "Expression, Purification and Crystallization of an Archaeal-type Phosphoenolpyruvate Carboxylase", Acta Crystallogr. F 65, 1193 (2009) doi: 10.1107/S1744309109042663
  72. G. J. Dick, B. G. Clement, S. M. Webb, F. J. Fodrie, J. R. Bargar and B. M. Tebo, "Enzymatic Microbial Mn(II) Oxidation and Mn Biooxide Production in the Guaymas Basis Deep-Sea Hydrothermal Plume", Geochim. Cosmochim. Acta 73, 6517 (2009) doi: 10.1016/j.gca.2009.07.039
  73. K. M. Dokken, J. G. Parsons, J. McClure and J. L. Gardea-Torresdey, "Synthesis and Structural Analysis of Copper(II) Cysteine Complexes", Inorg. Chim. Acta 362, 395 (2009) doi: 10.1016/j.ica.2008.04.037
  74. C. J. Doonan, W. Morris, H. Furukawa and O. M. Yaghi, "Isoreticular Metalation of Metal-Organic Frameworks", J. Am. Chem. Soc. 131, 9492 (2009) doi: 10.1021/ja903251e
  75. T. Doukov, H. Li, M. Soltis and T. L. Poulos, "Single Crystal Structural and Absorption Spectral Characterizations of Nitric Oxide Synthase Complexed with Nw-Hydroxy-L-arginine and Diatomic Ligands", Biochemistry 48, 10246 (2009) doi: 10.1021/bi9009743
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  387. M. Yi, D. H. Lu, J. G. Analytis, J.-H. Chu, S.-K. Mo, R.-H. He, M. Hashimoto, R. G. Moore, I. I. Mazin, D. J. Singh, Z. Hussain, I. R. Fisher and Z.-X. Shen, "Unconventional Electronic Reconstruction in Undoped (Ba,Sr)Fe2As2 across the Spin Density Wave Transition", Phys. Rev. B 80, 174510 (2009) doi: 10.1103/PhysRevB.80.174510
  388. M. Yi, D. H. Lu, J. G. Analytis, J.-H. Chu, S.-K. Mo, R.-H. He, R. G. Moore, X. J. Zhou, G. F. Chen, J. L. Luo, N. L. Wang, Z. Hussain, D. J. Singh, I. R. Fisher and Z.-X. Shen, "Electronic Structure of the BaFe2As2 Family of Iron-Pnictide Superconductors", Phys. Rev. B 80, 024515 (2009) doi: 10.1103/PhysRevB.80.024515
  389. I. Yocupicio-Villegas, H. E. Esparza-Ponce and A. Duarte-Möller, "X-ray Absorption Spectroscopy and X-ray Diffraction Analysis of Crystalline CoTi2 Grown by DC Co-sputtering: A Theoretical and Experimental Comparison", J. Alloys Compd. 474, 283 (2009) doi: 10.1016/j.jallcom.2008.06.129
  390. A. Yonath, "Large Facilities and the Evolving Ribosome, the Cellular Machine for Genetic-code Translation", J. R. Soc. Interface 6, S575 (2009) doi: 10.1098/?rsif.2009.0167.focus
  391. J. Yoon, S. A. Wilson, Y. K. Jang, M. S. Seo, K. Nehru, B. Hedman, K. O. Hodgson, E. Bill, E. I. Solomon and W. Nam, "Reactive Intermediates in Oxygenation Reactions with Mononuclear Nonheme Iron Catalysts", Angew. Chem., Int. Ed. Engl. 48, 1257 (2009) doi: 10.1002/anie.200802672
  392. T. Yoshida, S. Komiya, X. J. Zhou, K. Tanaka, A. Fujimori, Z. Hussain, Z.-X. Shen, Y. Ando, H. Eisaki and S. Uchida, "Zn-impurity Effects on Quasiparticle Scattering in La2-xSrxCuO4 Studied by Angle-resolved Photoemission Spectroscopy", Phys. Rev. B 80, 245113 (2009) doi: 10.1103/PhysRevB.80.245113
  393. J. M. Yoshizawa, M. A. Blank, A. W. Fay, C. C. Lee, J. A. Wiig, Y. Hu, K. O. Hodgson, B. Hedman and M. W. Ribbe, "Optimization of FeMoco Maturation of NifEN", J. Am. Chem. Soc. 131, 9321 (2009) doi: 10.1021/ja9035225
  394. P. G. Young, R. Walanj, V. Lakshmi, L. J. Byrnes, P. Metcalf, E. N. Baker, S. B. Vakulenko and C. A. Smith, "The Crystal Structures of Substrate and Nucleotide Complexes of Enterococcus faecium Aminoglycoside-2"-Phosphotransferase-IIa [APH(2")-IIa] Provide Insights into Substrate Selectivity in the APH (2") Sub-Family", J. Bacteriol. 191, 4133 (2009) doi: 10.1128/JB.00149-09
  395. C. Yu, S. Koh, J. E. Leisch, M. F. Toney and P. Strasser, "Size and Composition Distribution of Alloy Nanoparticle Electrocatalysts Probed by Anomalous Small Angle X-ray Scattering (ASAXS)", Faraday Discuss. 140, 283 (2009) doi: 10.1039/b801586d
  396. J. Zaitseva, K. M. Meneely and A. L. Lamb, "Structure of Escherichia coli Malate Dehydrogenase at 1.45 Å Resolution", Acta Crystallogr. F 65, 866 (2009) doi: 10.1107/S1744309109032217
  397. B. M. Zeglis, V. C. Pierre, J. T. Kaiser and J. K. Barton, "A Bulky Rhodium Complex Bound to an Adenosine-Adenosine DNA Mismatch: General Architecture of the Metalloinsertion Binding Mode", Biochemistry 48, 4247 (2009) doi: 10.1021/bi900194e
  398. L. Zhang, J. Lichtmannegger, K. H. Summer, S. Webb, I. J. Pickering and G. N. George, "Tracing Copper-Thiomolybdate Complexes in a Prospective Treatment for Wilson's Disease", Biochemistry 48, 891 (2009) doi: 10.1021/bi801926e
  399. R. Zhang, C. Li, L. K. Williams, B. P. Rempel, G. D. Brayer and S. G. Withers, "Directed "in Situ" Inhibitor Elongation as a Strategy to Structurally Characterize the Covalent Glycosyl-Enzyme Intermediate of Human Pancreatic a-Amylase", Biochemistry 48, 10752 (2009) doi: 10.1021/bi901400p
  400. Y. Zhang, M. M. Cherney, M. Solomonson, J. Liu, M. N. G. James and J. H. Weiner, "Preliminary X-ray Crystallographic Analysis of Sulfide:Quinone Oxidoreductase from Acidithiobacillus ferrooxidans", Acta Crystallogr. F 65, 839 (2009) doi: 10.1107/S1744309109027535
  401. Y. Zhang, I. Thiele, D. Weekes, Z. Li, L. Jaroszewski, K. Ginalski, A. M. Deacon, J. Wooley, S. A. Lesley, I. A. Wilson, B. Palsson, A. Osterman and A. Godzik, "Three-dimensional Structural View of the Central Metabolic Network of Thermotoga maritima", Science 325, 1544 (2009) doi: 10.1126/science.1174671
  402. Y. Zhang, J. Wei, H. W. Ou, J. F. Zhao, B. Zhou, F. Chen, M. Xu, C. He, G. Wu, H. Chen, M. Arita, K. Shimada, H. Namatame, M. Taniguchi, X. H. Chen and D. L. Feng, "Unusual Doping Dependence of the Electronic Structure and Coexistence of Spin-Density-Wave and Superconductor Phases in Single Crystalline Sr1-xKxFe2As2", Phys. Rev. Lett. 102, 127003 (2009) doi: 10.1103/PhysRevLett.102.127003
  403. Z. Zhang, E. M. M. Bulloch, R. D. Bunker, E. N. Baker and C. J. Squire, "Structure and Function of GlmU from Mycobacterium tuberculosis", Acta Crystallogr. D 65, 275 (2009) doi: 10.1107/S0907444909001036
  404. Z. Zhang, T. T. Caradoc-Davies, J. M. Dickson, E. N. Baker and C. J. Squire, "Structures of Glycinamide Ribonucleotide Transformylase (PurN) from Mycobacterium tuberculosis Reveal a Novel Dimer with Relevance to Drug Discovery", J. Mol. Biol. 389, 722 (2009) doi: 10.1016/j.jmb.2009.04.044
  405. Z. Zhang, G. Helms, S. B. Clark, G. Tian, P. Zanonato and L. Rao, "Complexation of Uranium(VI) by Gluconate in Acidic Solutions: A Thermodynamic Study with Structural Analysis", Inorg. Chem. 48, 3814 (2009) doi: 10.1021/ic8018925
  406. H. Zhao and L. Tang, "Crystallographic Characterization of a Multidomain Histidine Protein Kinase from an Essential Two-Component Regulatory System", Acta Crystallogr. F 65, 346 (2009) doi: 10.1107/S174430910900668X
  407. L. Zhao, N. T. Nguyen, R. C. Fernandez and M. E. P. Murphy, "Crystallographic Characterization of the Passenger Domain of the Bordetella Autotransporter BrkA", Acta Crystallogr. F 65, 608 (2009) doi: 10.1107/S174430910901642X
  408. Y. Zhao, J. G. Parsons, J. R. Peralta-Videa, M. L. Lopez-Moreno and J. L. Gardea-Torresdey, "Use of Synchrotron- and Plasma-based Spectroscopic Techniques to Determine the Uptake and Biotransformation of Chromium(III) and Chromium(VI) by Parkinsonia aculeata", Metallomics 1, 330 (2009) doi: 10.1039/b822927a
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Books & Conferences

  1. J. C. Andrews, S. Brennan, Y. Liu, P. Pianetta, E. A. C. Almeida, M. C. H. van der Meulen, Z. Wu, Z. Mester, L. Ouerdane, J. Gelb, M. Feser, J. Rudati, A. Tkachuk and W. Yun, "Full-field Transmission X-ray Microscopy for Bio-imaging", in J. Phys. Conf. Ser. 186, 012081 (2009) doi: 10.1088/1742-6596/186/1/012081
  2. J. C. Andrews, S. Brennan, P. Pianetta, H. Ishii, J. Gelb, M. Feser, J. Rudati, A. Tkachuk and W. Yun, "Full-field Transmission X-ray Microscopy at SSRL", J. Phys. Conf. Ser. 186, 012002 (2009) doi: 10.1088/1742-6596/186/1/012002
  3. U. Bergmann and K. Knox, "Pseudo-color Enhanced X-ray Fluorescence Imaging of the Archimedes Palimpsest", Document Recognition and Retrieval XVI, K. Berkner, L. Likforman-Sulem (eds.), Proc. of SPIE-IS&T Electronic Imaging, SPIE 7247, 724702 (2009)
  4. C. H. Booth and J. N. Mitchell, "A Moving Target: Responding to Magnetic and Structural Disorder in Lanthanide- and Actinide-based Superconductors", in Actinides, July 12-17, 2009.  IOP Conf. Ser: Mater. Sci. Eng. 9, 012087 (2009)
  5. K. C. Kondapalli, A. Dancis and T. L. Stemmler, "Molecular Interaction between Frataxin and Ferrochelatase during Heme Assembly", in E. C. Long and M. J. Baldwin (eds.)., Bioinorganic Chemistry; Cellular Systems and Synthetic Models, ACS Symposium Series, 1012 (2009), pp. 17-30 doi: 10.1021/bk-2009-1012.ch002
  6. R. M. Maier, S. Iverson, J. Chorover and S. M. Hayes, "Combined FISH, u-XRF and SEM Analysis to Examine Microbe-Metal Interactions on Root Surfaces", in Goldschmidt, Davos, Switzerland, 21-26 June 2009
  7. N. Perdrial, A. Thompson and J. Chorover, "Effects of Mineral Tranformations, Contaminant Concentration, and CO2 Pressure on Contaminant Speciation and Mobility in Simulated Hanford Sediments", in Clay Mineral Society Meeting, Billings, MT, 5-11 June 2009
  8. E. I. Solomon, R. K. Hocking and M. Y. M. Pau, "Nature of the Catecholate-Fe(III) Bond: High Affinity Binding and Substrate Activation in Bioinorganic Chemistry", in Computational Inorganic and Bioinorganic Chemistry, Encyclopedia Inorganic Chemistry Monograph, Wiley (2009)
  9. J. Yano, Y. Pushkar, J. Messinger, U. Bergmann, P. Glatzel and V. K. Yachandra, "Electronic Structure and Oxidation State Changes in the Mn4Ca Cluster of Photosystem II", in Energy from the Sun, Proceedings of the 14th International Congress of Photosynthesis, J. Allen, E. Gantt, J. Golbeck, B. Osmond, B. (eds.) Springer, Dordrecht., in press
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